covid-sim

Note

SCARF is migrating to the SLURM batch system, instructions on this page which refer to LSF commands, parameters or configuration do not apply to SLURM. Please see our SLURM page for more information.

RHEL7 Modules:

covid-sim/0.8.0-GCC-8.2.0-2.31.1
covid-sim/0.8.0-intel-2019_update2

Description for covid-sim:

Source: https://github.com/mrc-ide/covid-sim

CovidSim simulates the transmission dynamics and severity of COVID-19 infections across a population structured both spatially and socially over time. It facilitates the modeling of the impact of intervention policies and healthcare provision on the spread of COVID-19.

Using covid-sim:

module load covid-sim

Documentation for covid-sim:

Documentation can be found here:

https://github.com/mrc-ide/covid-sim

We don’t yet provide any specific documentation for this software, if you need assistance please contact the helpdesk.